Package: ipd
Title: Inference on Predicted Data
Version: 0.4.1.9000
Authors@R: c(
      person(given = "Stephen", family = "Salerno",
        email = "ssalerno@fredhutch.org", role = c("aut", "cre", "cph"),
        comment = c(ORCID = "0000-0003-2763-0494")),
      person(given = "Jiacheng", family = "Miao",
        email = "jmiao24@wisc.edu", role = c("aut")),
      person(given = "Awan", family = "Afiaz",
        email = "aafiaz@uw.edu", role = c("aut")),
      person(given = "Kentaro", family = "Hoffman",
        email = "khoffm3@uw.edu", role = c("aut")),
      person(given = "Jesse", family = "Gronsbell",
        email = "j.gronsbell@utoronto.ca", role = c("aut")),
      person(given = "Jianhui", family = "Gao",
        email = "jianhui.gao@mail.utoronto.ca", role = c("aut")),
      person(given = "David", family = "Cheng",
        email = "dcheng@mgh.harvard.edu", role = c("aut")),
      person(given = "Anna", family = "Neufeld",
        email = "acn2@williams.edu", role = c("aut")),
      person(given = "Qiongshi", family = "Lu",
        email = "qlu@biostat.wisc.edu", role = c("aut")),
      person(given = "Tyler H", family = "McCormick",
        email = "tylermc@uw.edu", role = c("aut")),
      person(given = "Jeffrey T", family = "Leek",
        email = "jtleek@fredhutch.org", role = c("aut")))
Description: Performs valid statistical inference on predicted data
        (IPD) using recent methods, where for a subset of the data, the
        outcomes have been predicted by an algorithm. Provides a
        wrapper function with specified defaults for the type of model
        and method to be used for estimation and inference. Further
        provides methods for tidying and summarizing results. Salerno
        et al., (2025) <doi:10.1093/bioinformatics/btaf055>.
License: MIT + file LICENSE
URL: https://github.com/ipd-tools/ipd, https://ipd-tools.github.io/ipd/
BugReports: https://github.com/ipd-tools/ipd/issues
Depends: R (>= 4.4.0)
Imports: methods, generics, caret, gam, ranger, splines, stats, MASS,
        randomForest, tibble
Suggests: knitr, patchwork, rmarkdown, spelling, testthat (>= 3.0.0),
        tidyverse, xfun (>= 0.51), BiocStyle, BiocManager
VignetteBuilder: knitr
biocViews: Software, StatisticalMethod
Config/testthat/edition: 3
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.3
Language: en-US
Config/pak/sysreqs: libicu-dev
Repository: https://ipd-tools.r-universe.dev
Date/Publication: 2026-03-11 18:02:41 UTC
RemoteUrl: https://github.com/ipd-tools/ipd
RemoteRef: HEAD
RemoteSha: 95736e082e18c55c115dd347647282700f1c998d
NeedsCompilation: no
Packaged: 2026-09-21 11:42:34 UTC; root
Author: Stephen Salerno [aut, cre, cph] (ORCID:
    <https://orcid.org/0000-0003-2763-0494>),
  Jiacheng Miao [aut],
  Awan Afiaz [aut],
  Kentaro Hoffman [aut],
  Jesse Gronsbell [aut],
  Jianhui Gao [aut],
  David Cheng [aut],
  Anna Neufeld [aut],
  Qiongshi Lu [aut],
  Tyler H McCormick [aut],
  Jeffrey T Leek [aut]
Maintainer: Stephen Salerno <ssalerno@fredhutch.org>